Structure updated and intqpipopt files added

1 files changed, 308 insertions, 0 deletions

diff --git a/newstructure/thirdparty/linux/include/coin/CglClique.hpp b/newstructure/thirdparty/linux/include/coin/CglClique.hpp
new file mode 100644
index 0000000..5b47b40
--- /dev/null
+++ b/newstructure/thirdparty/linux/include/coin/CglClique.hpp
@@ -0,0 +1,308 @@
+// $Id: CglClique.hpp 1119 2013-04-06 20:24:18Z stefan $
+// Copyright (C) 2000, International Business Machines
+// Corporation and others.  All Rights Reserved.
+// This code is licensed under the terms of the Eclipse Public License (EPL).
+
+#ifndef _CglClique_h_
+#define _CglClique_h_
+
+#include "CglCutGenerator.hpp"
+
+//class OsiCuts;
+//class OsiSolverInterface;
+
+class CglClique : public CglCutGenerator {
+
+    friend void CglCliqueUnitTest(const OsiSolverInterface * siP,
+				  const std::string mpdDir );
+public:
+    /// Copy constructor
+    CglClique(const CglClique& rhs);
+    /// Clone
+    virtual CglCutGenerator * clone() const;
+
+    /// Assignment operator
+    CglClique& operator=(const CglClique& rhs);
+   
+public:
+    
+    virtual void
+    generateCuts(const OsiSolverInterface& si, OsiCuts & cs,
+		 const CglTreeInfo info = CglTreeInfo());
+   
+    /**@name Constructors and destructors */
+    //@{
+    /** Default constructor.
+	If the setPacking argument is set to true then CglClique will assume that the
+	problem in the solverinterface passed to the generateCuts() method
+	describes a set packing problem, i.e.,
+	- all variables are binary
+	- the matrix is a 0-1 matrix
+	- all constraints are '= 1' or '<= 1'
+       
+	Otherwise the user can use the considerRows() method to set the list of
+	clique rows, that is,
+	- all coeffs corresponding to binary variables at fractional level is 1
+	- all other coeffs are non-negative
+	- the constraint is '= 1' or '<= 1'.
+
+	If the user does not set the list of clique rows then CglClique will
+	start the generateCuts() methods by scanning the matrix for them.
+	Also justOriginalRows can be set to true to limit clique creation
+    */
+    CglClique(bool setPacking = false, bool justOriginalRows = false);
+    /// Destructor
+    virtual ~CglClique() {}
+    /// Create C++ lines to get to current state
+    virtual std::string generateCpp( FILE * fp);
+
+    void considerRows(const int numRows, const int* rowInd);
+
+public:
+    /** possible choices for selecting the next node in the star clique search
+     */
+    enum scl_next_node_method {
+	SCL_MIN_DEGREE,
+	SCL_MAX_DEGREE,
+	SCL_MAX_XJ_MAX_DEG
+    };
+
+    void setStarCliqueNextNodeMethod(scl_next_node_method method) {
+	scl_next_node_rule = method;
+    }
+
+    void setStarCliqueCandidateLengthThreshold(int maxlen) {
+	scl_candidate_length_threshold = maxlen;
+    }
+    void setRowCliqueCandidateLengthThreshold(int maxlen) {
+	rcl_candidate_length_threshold = maxlen;
+    }
+
+    void setStarCliqueReport(bool yesno = true) { scl_report_result = yesno; }
+    void setRowCliqueReport(bool yesno = true) { rcl_report_result = yesno; }
+
+    void setDoStarClique(bool yesno = true) { do_star_clique = yesno; }
+    void setDoRowClique(bool yesno = true) { do_row_clique = yesno; }
+
+    void setMinViolation(double minviol) { petol = minviol; }
+    double getMinViolation() const { return petol; }
+
+private:
+
+    struct frac_graph ;
+    friend struct frac_graph ;
+
+    /** A node of the fractional graph. There is a node for every variable at
+	fractional level. */
+    struct fnode {
+	/** pointer into all_nbr */
+	int          *nbrs;
+	/** 1-x_i-x_j, needed for odd holes, in the same order as the adj list,
+	    pointer into all_edgecost */
+	double       *edgecosts;
+	/** degree of the node */
+	int           degree;
+	/** the fractional value of the variable corresponding to this node */
+	double        val;
+    };
+
+    /** A graph corresponding to a fractional solution of an LP. Two nodes are
+	adjacent iff their columns are non-orthogonal. */
+    struct frac_graph {
+	/** # of nodes = # of fractional values in the LP solution */
+	int    nodenum;
+	/** # of edges in the graph */
+	int    edgenum;
+	/** density= edgenum/(nodenum choose 2) */
+	double density;
+	int    min_deg_node;
+	int    min_degree;
+	int    max_deg_node;
+	int    max_degree;
+	/** The array of the nodes in the graph */
+	fnode  *nodes;
+	/** The array of all the neighbors. First the indices of the nodes
+	    adjacent to node 0 are listed, then those adjacent to node 1, etc. */
+	int    *all_nbr;
+	/** The array of the costs of the edges going to the neighbors */
+	double *all_edgecost;
+
+	frac_graph() :
+	    nodenum(0), edgenum(0), density(0),
+	    min_deg_node(0), min_degree(0), max_deg_node(0), max_degree(0),
+	    nodes(0), all_nbr(0), all_edgecost(0) {}
+    };
+
+protected:
+    /** An indicator showing whether the whole matrix in the solverinterface is
+	a set packing problem or not */
+    bool setPacking_;
+    /// True if just look at original rows
+    bool justOriginalRows_;
+    /** pieces of the set packing part of the solverinterface */
+    int sp_numrows;
+    int* sp_orig_row_ind;
+    int sp_numcols;
+    int* sp_orig_col_ind;
+    double* sp_colsol;
+    int* sp_col_start;
+    int* sp_col_ind;
+    int* sp_row_start;
+    int* sp_row_ind;
+
+    /** the intersection graph corresponding to the set packing problem */
+    frac_graph fgraph;
+    /** the node-node incidence matrix of the intersection graph. */
+    bool* node_node;
+
+    /** The primal tolerance in the solverinterface. */
+    double petol;
+
+    /** data for the star clique algorithm */
+
+    /** Parameters */
+    /**@{*/
+    /** whether to do the row clique algorithm or not. */
+    bool do_row_clique;
+    /** whether to do the star clique algorithm or not. */
+    bool do_star_clique;
+
+    /** How the next node to be added to the star clique should be selected */
+    scl_next_node_method scl_next_node_rule;
+    /** In the star clique method the maximal length of the candidate list
+	(those nodes that are in a star, i.e., connected to the center of the
+	star) to allow complete enumeration of maximal cliques. Otherwise a
+	greedy algorithm is used. */
+    int scl_candidate_length_threshold;
+    /** whether to give a detailed statistics on the star clique method */
+    bool scl_report_result;
+
+    /** In the row clique method the maximal length of the candidate list
+	(those nodes that can extend the row clique, i.e., connected to all
+	nodes in the row clique) to allow complete enumeration of maximal
+	cliques. Otherwise a greedy algorithm is used. */
+    int rcl_candidate_length_threshold;
+    /** whether to give a detailed statistics on the row clique method */
+    bool rcl_report_result;
+    /**@}*/
+
+    /** variables/arrays that are used across many methods */
+    /**@{*/
+    /** List of indices that must be in the to be created clique. This is just
+	a pointer, it is never new'd and therefore does not need to be
+	delete[]'d either. */
+    const int* cl_perm_indices;
+    /** The length of cl_perm_indices */
+    int cl_perm_length;
+
+    /** List of indices that should be considered for extending the ones listed
+	in cl_perm_indices. */
+    int* cl_indices;
+    /** The length of cl_indices */
+    int cl_length;
+
+    /** An array of nodes discarded from the candidate list. These are
+	rechecked when a maximal clique is found just to make sure that the
+	clique is really maximal. */
+    int* cl_del_indices;
+    /** The length of cl_del_indices */
+    int cl_del_length;
+
+    /**@}*/
+
+private:
+    /** Scan through the variables and select those that are binary and are at
+	a fractional level. */
+    void selectFractionalBinaries(const OsiSolverInterface& si);
+    /** Scan through the variables and select those that are at a fractional
+	level. We already know that everything is binary. */
+    void selectFractionals(const OsiSolverInterface& si);
+    /**  */
+    void selectRowCliques(const OsiSolverInterface& si,int numOriginalRows);
+    /**  */
+    void createSetPackingSubMatrix(const OsiSolverInterface& si);
+    /**  */
+    void createFractionalGraph();
+    /**  */
+    int createNodeNode();
+    /**  */
+    void deleteSetPackingSubMatrix();
+    /**  */
+    void deleteFractionalGraph();
+    /**  */
+    void find_scl(OsiCuts& cs);
+    /**  */
+    void find_rcl(OsiCuts& cs);
+    /**  */
+    int scl_choose_next_node(const int current_nodenum,
+			     const int *current_indices,
+			     const int *current_degrees,
+			     const double *current_values);
+    /**  */
+    void scl_delete_node(const int del_ind, int& current_nodenum,
+			 int *current_indices, int *current_degrees,
+			 double *current_values);
+    /**  */
+    int enumerate_maximal_cliques(int& pos, bool* scl_label, OsiCuts& cs);
+    /**  */
+    int greedy_maximal_clique(OsiCuts& cs);
+    /**  */
+    void recordClique(const int len, int* indices, OsiCuts& cs);
+};
+//#############################################################################
+/** A function that tests the methods in the CglClique class. The
+    only reason for it not to be a member method is that this way it doesn't
+    have to be compiled into the library. And that's a gain, because the
+    library should be compiled with optimization on, but this method should be
+    compiled with debugging. */
+void CglCliqueUnitTest(const OsiSolverInterface * siP,
+		       const std::string mpdDir);
+/// This works on a fake solver i.e. invented rows
+class CglProbing;
+class CglFakeClique : public CglClique {
+  
+public:
+  /// Copy constructor
+  CglFakeClique(const CglFakeClique& rhs);
+  /// Clone
+  virtual CglCutGenerator * clone() const;
+  
+  /// Assignment operator
+  CglFakeClique& operator=(const CglFakeClique& rhs);
+  
+  virtual void
+  generateCuts(const OsiSolverInterface& si, OsiCuts & cs,
+	       const CglTreeInfo info = CglTreeInfo());
+  
+  /**@name Constructors and destructors */
+  //@{
+  /** Default constructor.
+      If the setPacking argument is set to true then CglFakeClique will assume that the
+      problem in the solverinterface passed to the generateCuts() method
+      describes a set packing problem, i.e.,
+      - all variables are binary
+      - the matrix is a 0-1 matrix
+      - all constraints are '= 1' or '<= 1'
+      
+      Otherwise the user can use the considerRows() method to set the list of
+      clique rows, that is,
+      - all coeffs corresponding to binary variables at fractional level is 1
+      - all other coeffs are non-negative
+      - the constraint is '= 1' or '<= 1'.
+      
+      If the user does not set the list of clique rows then CglFakeClique will
+      start the generateCuts() methods by scanning the matrix for them.
+  */
+  CglFakeClique(OsiSolverInterface * solver=NULL,bool setPacking = false);
+  /// Destructor
+  virtual ~CglFakeClique();
+  /// Assign solver (generator takes over ownership)
+  void assignSolver(OsiSolverInterface * fakeSolver);
+protected:
+  /// fake solver to use
+  OsiSolverInterface * fakeSolver_;
+  /// Probing object
+  CglProbing * probing_;
+};
+
+#endif