1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
|
from PyQt5.QtCore import *
from PyQt5.QtWidgets import *
from PyQt5.QtGui import *
from PyQt5.uic import loadUiType
import os, sys
import pandas as pd
from Simulator.Databases.Databases import ChemsepDatabase
ui_dialog,_ = loadUiType('ComponentSelector.ui')
#df = pd.read_csv("compoundsDatabase.csv")
compound_selected = [] #list storing components that are selected inintialised as empty
class ComponentSelector(QDialog,ui_dialog):
def __init__(self,parent=None):
QDialog.__init__(self,parent)
self.setupUi(self)
self.dict1=dict()#empty dictionary which will store the obj and its compound
#self.DB1=#instance of Database class in Database.py module
self.instance=[ChemsepDatabase()] #list of all the instances
self.lines=[]
for i in self.instance:
x=i.get_comp_name_list()
self.dict1[i]=x
self.lines+=x
print(self.lines)
#self.DB1_list=self.DB1.get_comp_name_list()
#storingchemsep
#database compound list in DB1_list
#self.dict1[self.DB1]=self.DB1_list #storing the list as a value and the db as key in dictionary
#self.lines=self.DB1_list #combined list of all the edited compounds
self.model = QStringListModel()
self.model.setStringList(self.lines)
self.completer = QCompleter()
self.completer.setCaseSensitivity(Qt.CaseInsensitive)
self.completer.setModel(self.model)
# QCompleter completes the text written in lineedit
self.lineEdit.setCompleter(self.completer)
self.compoundSelectButton.clicked.connect(self.compound_selection)
self.compoundSelectButton.setAutoDefault(False)
self.pushButton.clicked.connect(self.accept)
self.pushButton_2.clicked.connect(self.cancel)
self.pushButton_3.clicked.connect(self.remove_items)
def final_list(self,*list_name):
self.list_final=[]
#add multiple lists
for i in list_name:
self.list_final+=i
return (self.list_final)
def is_compound_selected(self):
if not compound_selected:
return False
else:
return True
#attrib:
#CAS fro CAS Number
#CompoundID for Name
#Smiles for Molecular Formula
#MolecularWeight for Molecular Weight
#the below function will match the entered compound and get the database obj
#of the corresponding database
def get_object(self,component):
for ele in self.dict1:
values=self.dict1[ele]
for ind in values:
if ind ==component:
return(ele)
#the below finction removes the before added extra string from the cmpounds
def get_original_name(self,component,removing_attrib):
self.temp_comp= component.replace(removing_attrib,'')
return(self.temp_comp)
def compound_selection(self, *args):
if len(args) == 2:
self.comp = args[1] #helpful when loading saved data
else:
self.comp = self.lineEdit.text() #gets entered text
if self.comp in self.lines: #matches with the db
if self.comp not in compound_selected:
compound_selected.append(self.comp) # appending compound in the list
self.obj=self.get_object(self.comp) #obj will store the key of the dictionary
#and thus store the instance of the class to which the component belongs
self.removing_attrib='(' + self.obj.name + ')' #getting the attribute that is to be removed
self.comp=self.get_original_name(self.comp,self.removing_attrib)
#getting only air, water etc from air chemsep etc
self.prop_list=self.obj.get_comp_prop(self.comp) #getting prop of the comp
#obj is the required class object
# self.creating_mo_file()
self.final_mo()
self.lineEdit.clear()
print(compound_selected)
self.CAS=self.obj.get_value(self.comp,'CAS')
self.name=self.comp
self.molecular_formula=self.obj.get_value(self.comp, 'StructureFormula')
self.molecular_weight=self.obj.get_value(self.comp, 'MolecularWeight')
dict={'CAS':self.CAS,'Name':self.name,'Molecular Formula':self.molecular_formula,'Molecular Weight':self.molecular_weight}
#converted everything to a dictionary which will be passes to addtable
#function as a parameter.
print(dict)
self.add_to_table(dict)
else:
self.show_error()
@staticmethod
def set_compounds(compounds):
# compound_selected = compounds
for i in compounds:
compound_selected.append(i)
def add_to_table(self,a):
try:
row_position = self.tableWidget.rowCount()
self.tableWidget.insertRow(row_position)
self.tableWidget.setItem(row_position , 0, QTableWidgetItem(str(a['CAS'])))
self.tableWidget.setItem(row_position , 1, QTableWidgetItem(str(a['Name'])))
self.tableWidget.setItem(row_position , 2, QTableWidgetItem(str(a['Molecular Formula'])))
self.tableWidget.setItem(row_position , 3, QTableWidgetItem(str(a['Molecular Weight'])))
except Exception as e:
exc_type, exc_obj, exc_tb = sys.exc_info()
fname = os.path.split(exc_tb.tb_frame.f_code.co_filename)[1]
print(exc_type, fname, exc_tb.tb_lineno)
def add_compounds_to_list(self,comp): # which list?
self.item = QListWidgetItem()
self.item.setText(comp)
self.listWidget.addItem(self.item)
def remove_items(self):
try:
item = self.tableWidget.item(self.tableWidget.currentRow(),1).text() + '(chemsep)'
self.tableWidget.removeRow(self.tableWidget.currentRow())
compound_selected.remove(item)
except Exception as e:
print(e)
def show_error(self):
QMessageBox.about(self, 'Important', "Selected Compound is not Available")
def cancel(self):
compound_selected.clear()
self.tableWidget.setRowCount(0)
self.reject()
def get_compounds(self):
return compound_selected
def final_mo(self):
self.f_mo=open('Simulator/database.mo','w+')
self.f_mo.write('package database\n')
for line in self.prop_list:
self.f_mo.write(line)
self.f_mo.write('\n')
self.f_mo.write('\nend database;')
self.f_mo.close()
|