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diff --git a/project/templates/talk/conf_schedule.html b/project/templates/talk/conf_schedule.html index 446d654..d6dcf4b 100644 --- a/project/templates/talk/conf_schedule.html +++ b/project/templates/talk/conf_schedule.html @@ -17,21 +17,21 @@ <tr><td class="right">09:30-10:30</td><td class="left">Perry Greenfield</td><td class="left"><b>Keynote</b>: <a href="#sec-3_1">How Python Slithered into Astronomy</a></td></tr> <tr><td class="right">10:30-10:45</td><td class="left"></td><td class="left">Tea Break</td></tr> <tr><td class="right">10:45-11:30</td><td class="left">Fernando Perez</td><td class="left"><b>Special Talk</b>: <a href="#sec-3_2">IPython : Beyond the Simple Shell</a></td></tr> -<tr><td class="right">11:30-12:00</td><td class="left">Asim Mittal</td><td class="left"><a href="#sec-4_1">Interactive interfaces and Gesture recognition using Python</a></td></tr> -<tr><td class="right">12:00-12:20</td><td class="left">Jayesh Gandhi</td><td class="left"><a href="#sec-4_14">Microcontroller experiment and its simulation using Python</a></td></tr> -<tr><td class="right">12:20-12:50</td><td class="left">Vaidhy Mayilrangam</td><td class="left"><a href="#sec-4_17">Natural Language Processing Using Python</a></td></tr> -<tr><td class="right">12:50-13:20</td><td class="left">Georges Khaznadar</td><td class="left"><a href="#sec-4_10">Live media for training in experimental sciences</a></td></tr> -<tr><td class="right">13:20-14:20</td><td class="left"></td><td class="left">Lunch</td></tr> -<tr><td class="right">14:20-14:30</td><td class="left">Shubham Chakraborty</td><td class="left"><a href="#sec-4_11">Use of Python and Phoenix-M interface in Robotics</a></td></tr> -<tr><td class="right">14:30-14:40</td><td class="left">Erroju Rama Krishna</td><td class="left"><a href="#sec-4_8">Simplified and effective Network Simulation using ns-3</a></td></tr> -<tr><td class="right">14:40-14:50</td><td class="left"></td><td class="left">More Lightning Talks</td></tr> -<tr><td class="right">14:50-15:20</td><td class="left">Asokan Pichai</td><td class="left"><b>Invited Talk</b>: <a href="#sec-3_3">Teaching Programming with Python</a></td></tr> -<tr><td class="right">15:20-15:40</td><td class="left">Hemanth Chandran</td><td class="left"><a href="#sec-4_19">Performance Evaluation of HYBRID MAC for 802.11ad: Next Generation Multi-Gbps Wi-Fi using SimPy</a></td></tr> -<tr><td class="right">15:40-16:00</td><td class="left">Karthikeyan selvaraj</td><td class="left"><a href="#sec-4_9">PyCenter</a></td></tr> -<tr><td class="right">16:00-16:15</td><td class="left"></td><td class="left">Tea Break</td></tr> -<tr><td class="right">16:15-16:45</td><td class="left">Satrajit Ghosh</td><td class="left"><b>Invited Talk</b>: <a href="#sec-3_6">Nipype: Opensource platform for unified and replicable interaction with existing neuroimaging tools</a></td></tr> -<tr><td class="right">16:45-17:05</td><td class="left">Nek Sharan</td><td class="left"><a href="#sec-4_7">Parallel Computation of Axisymmetric Jets</a></td></tr> -<tr><td class="right">17:05-17:25</td><td class="left">pankaj pandey</td><td class="left"><a href="#sec-4_20">PySPH: Smooth Particle Hydrodynamics with Python</a></td></tr> +<tr><td class="right">11:30-11:50</td><td class="left">Farhat Habib</td><td class="left"><a href="#sec-4_1">Python as a Platform for Scientific Computing Literacy for 10+2 Students: Weighing the Balance</a></td></tr> +<tr><td class="right">11:50-12:10</td><td class="left">Jayesh Gandhi</td><td class="left"><a href="#sec-4_14">Microcontroller experiment and its simulation using Python</a></td></tr> +<tr><td class="right">12:10-12:40</td><td class="left">Vaidhy Mayilrangam</td><td class="left"><a href="#sec-4_17">Natural Language Processing Using Python</a></td></tr> +<tr><td class="right">12:40-13:10</td><td class="left">Georges Khaznadar</td><td class="left"><a href="#sec-4_10">Live media for training in experimental sciences</a></td></tr> +<tr><td class="right">13:10-14:10</td><td class="left"></td><td class="left">Lunch</td></tr> +<tr><td class="right">14:10-14:20</td><td class="left">Shubham Chakraborty</td><td class="left"><a href="#sec-4_11">Use of Python and Phoenix-M interface in Robotics</a></td></tr> +<tr><td class="right">14:20-14:30</td><td class="left">Erroju Rama Krishna</td><td class="left"><a href="#sec-4_8">Simplified and effective Network Simulation using ns-3</a></td></tr> +<tr><td class="right">14:30-14:40</td><td class="left"></td><td class="left">More Lightning Talks</td></tr> +<tr><td class="right">14:40-15:10</td><td class="left">Asokan Pichai</td><td class="left"><b>Invited Talk</b>: <a href="#sec-3_3">Teaching Programming with Python</a></td></tr> +<tr><td class="right">15:10-15:30</td><td class="left">Hemanth Chandran</td><td class="left"><a href="#sec-4_19">Performance Evaluation of HYBRID MAC for 802.11ad: Next Generation Multi-Gbps Wi-Fi using SimPy</a></td></tr> +<tr><td class="right">15:30-15:50</td><td class="left">Karthikeyan selvaraj</td><td class="left"><a href="#sec-4_9">PyCenter</a></td></tr> +<tr><td class="right">15:50-16:10</td><td class="left"></td><td class="left">Tea Break</td></tr> +<tr><td class="right">16:10-16:40</td><td class="left">Satrajit Ghosh</td><td class="left"><b>Invited Talk</b>: <a href="#sec-3_6">Nipype: Opensource platform for unified and replicable interaction with existing neuroimaging tools</a></td></tr> +<tr><td class="right">16:40-17:00</td><td class="left">Nek Sharan</td><td class="left"><a href="#sec-4_7">Parallel Computation of Axisymmetric Jets</a></td></tr> +<tr><td class="right">17:00-17:20</td><td class="left">pankaj pandey</td><td class="left"><a href="#sec-4_20">PySPH: Smooth Particle Hydrodynamics with Python</a></td></tr> </tbody> </table> @@ -60,7 +60,7 @@ <tr><td class="right">12:15-12:35</td><td class="left">Prashant Agrawal</td><td class="left"><a href="#sec-4_18">A Parallel 3D Flow Solver in Python Based on Vortex Methods</a></td></tr> <tr><td class="right">12:35-13:05</td><td class="left">Ajith Kumar</td><td class="left"><a href="#sec-4_12">Python in Science Experiments using Phoenix</a></td></tr> <tr><td class="right">13:05-14:05</td><td class="left"></td><td class="left">Lunch</td></tr> -<tr><td class="right">14:05-14:15</td><td class="left">Arun C. H.</td><td class="left"><a href="#sec-4_2">Usb Connectivity Using Python</a></td></tr> +<tr><td class="right">14:05-14:15</td><td class="left">Harikrishna</td><td class="left"><a href="#sec-4_23">Python based Galaxy workflow integration on GARUDA Grid</a></td></tr> <tr><td class="right">14:15-14:25</td><td class="left">Arun C. H.</td><td class="left"><a href="#sec-4_3">Automation of an Optical Spectrometer</a></td></tr> <tr><td class="right">14:25-14:35</td><td class="left"></td><td class="left"><a href="#More==Lightning==Talks">More Lightning Talks</a></td></tr> <tr><td class="right">14:35-14:55</td><td class="left">Krishnakant Mane</td><td class="left"><a href="#sec-4_22">Convincing Universities to include Python</a></td></tr> @@ -68,7 +68,7 @@ <tr><td class="right">15:15-15:35</td><td class="left">Puneeth Chaganti</td><td class="left"><a href="#sec-4_21">Pictures, Songs and Python</a></td></tr> <tr><td class="right">15:35-15:55</td><td class="left">Hrishikesh Deshpande</td><td class="left"><a href="#sec-4_5">Wavelet based denoising of ECG using Python</a></td></tr> <tr><td class="right">15:55-16:10</td><td class="left"></td><td class="left">Tea-Break</td></tr> -<tr><td class="right">16:10-16:40</td><td class="left">Jarrod Millman</td><td class="left"><b>Invited Talk</b>: <a href="#sec-3_8">Building an open development community for neuroimaging analysis</a></td></tr> +<tr><td class="right">16:10-16:40</td><td class="left">Jarrod Millman</td><td class="left"><b>Invited Talk</b><a href="#sec-3_8">Building an open development community for neuroimaging analysis</a></td></tr> <tr><td class="right">16:40-17:00</td><td class="left">Ramakrishna Reddy Yekulla</td><td class="left"><a href="#sec-4_13">Building and Packaging your Scientific Python Application For Linux Distributions</a></td></tr> <tr><td class="right">17:00-17:20</td><td class="left">Yogesh Karpate</td><td class="left"><a href="#sec-4_16">Automatic Proteomic Finger Printing using Scipy</a></td></tr> <tr><td class="right">17:20-17:40</td><td class="left">Manjusha Joshi</td><td class="left"><a href="#sec-4_15">SAGE for Scientific computing and Education enhancement</a></td></tr> @@ -313,10 +313,7 @@ bit about my PhD on super-resolution imaging! - - - -<h3 id="sec-3_8">Building an open development community for neuroimaging analysis </h3> +<h3 id="sec-3_8">Building an open development community for neuroimaging analysis</h3> <p>Jarrod Millman @@ -327,21 +324,20 @@ bit about my PhD on super-resolution imaging! <h4 id="sec-3_8_1">Talk/Paper Abstract </h4> -<p>Programming is becoming increasingly important to scientific activity. -As its importance grows, the need for better software tools becomes more -and more central to scientific practice. However, many fields of science -rely on badly written, poorly documented, and insufficiently tested -codebases. Moreover, scientific software packages often implement only the -approaches and algorithms needed or promoted by the specific lab where the -software was written. +<p>Programming is becoming increasingly important to scientific activity. As its +importance grows, the need for better software tools becomes more and more +central to scientific practice. However, many fields of science rely on +badly written, poorly documented, and insufficiently tested codebases. +Moreover, scientific software packages often implement only the approaches +and algorithms needed or promoted by the specific lab where the software +was written.</p> -In this talk, I will illustrate this situation by discussing some of the +<p>In this talk, I will illustrate this situation by discussing some of the weaknesses of the software ecosystem for neuroimaging analysis circa 2004. I will then describe how several of my colleagues and I are attempting to rectify this situation with a project called Neuroimaging in Python -(<a href="http://nipy.org">http://nipy.org</a>). Specifically, I will -discuss the approach we've taken (e.g., using Python) and the lessons -we've learned. +(http://nipy.org). Specifically, I will discuss the approach we've taken +(e.g., using Python) and the lessons we've learned. </p> @@ -358,10 +354,10 @@ we've learned. -<h3 id="sec-4_1">Interactive interfaces and Gesture recognition using Python </h3> +<h3 id="sec-4_1">Python as a Platform for Scientific Computing Literacy for 10+2 Students: Weighing the Balance </h3> -<p>Asim Mittal +<p>Farhat Habib </p> @@ -369,24 +365,30 @@ we've learned. <h4 id="sec-4_1_1">Talk/Paper Abstract </h4> -<p>Gesture recognition has caught on in a big way, but methods of -integrating it with intuitive control still remain largely -expensive and closed source. -</p> -<p> -This talk aims at combining the IR tracking ability of the -Nintendo Wiimote along with a little scientific computing in -Python (Linux) to create a means of intuitively controlling -applications and the operating system, using gestures drawn in 2D -space using your fingers. -</p> -<p> -This talk is an extension of the work that I have done from my -talk at PyCon India. +<p>The use of Python as a language for introducing computing is +becoming increasingly widespread. Here we report out findings +from two years of running an introduction to computing course +with Python as the programming language, and building upon it, +using SciPy as a scientific computing language in a course on +scientific computing. </p> + <p> -You can find out more about my work and ongoing research on my -blog: <a href="http://baniyakiduniya.blogspot.com">http://baniyakiduniya.blogspot.com</a> +The course is designed as a general computing course for +introducing computing to first year undergraduate students of +science. We find that a large majority of our incoming students +have no prior exposure to programming and none of the students +had any exposure to Python. Thus, the design of the course is +such that it allows everybody to be brought up to speed with +general programming concepts. Later, the students will later +specialize in varied topics from Biology to pure Mathematics, +thus, the course emphasizes general computing concepts over +specialized techniques. At a second course in Scien- tific +Computing numerical methods are introduced with the aid of +Scipy. The introduction to computing course has been taught +twice in Fall 2009 and 2010 to batches of around 100 students +each. In this paper we report our experience with teaching +Python and student and faculty feedback related to the course. </p> @@ -394,8 +396,6 @@ blog: <a href="http://baniyakiduniya.blogspot.com">http://baniyakiduniya.blogspo - - <h3 id="sec-4_2">Usb Connectivity Using Python </h3> @@ -1447,4 +1447,39 @@ clear the FUD regarding jobs </li> </ul> + + + + + + + +<h3 id="sec-4_23">Python based Galaxy workflow integration on GARUDA Grid </h3> + + +<p>Harikrishna +</p> + + + +<h4 id="sec-4_23_1">Talk/Paper Abstract </h4> + + +<p>Bioinformatics applications being complex problem involving +multiple comparisons, alignment, mapping and analysis can be +managed better using workflow solutions. Galaxy is an open web +based platform developed in Python for genomic research. Python +is a light weight dynamic language making Galaxy to be modular +and expandable. Bioinformatics applications being compute and +data intensive scale well in grid computing environments. In +this paper we describe bringing the Galaxy workflow to the +Garuda Grid computing infrastructure for enabling bioinformatics +applications. GAURDA grid is an aggregation of heterogeneous +resources and advanced capabilities for scientific +applications. Here we present the integration of galaxy workflow +tool with GARUDA grid middleware to enable computational +biologists to perform complex problems on the grid environment +through a web browser. +</p> + {% endblock content %} |